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ASAP 1.4.1 released May 11, 2007.
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Mauve - Alignment
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2006-Sep-19
Procrastination leads to efficient filtration for local multiple alignment. Aaron E Darling, Todd J Treangen, Louxin Zhang, Carla Kuiken, Xavier Messeguer, Nicole T. Perna. Lecture Notes in Bioinformatics 4175:126-137, Springer-Verlag 2006.
2004-Oct-19
Identifying evolutionarily conserved segments among multiple divergent and rearranged genomes. Bob Mau, Aaron E. Darling, Nicole T. Perna. Lecture Notes in Bioinformatics 3388:72-84, Springer-Verlag 2005.
2004-Jul-01
Mauve: Multiple Alignment of Conserved Genomic Sequence With Rearrangements. Aaron C. E. Darling, Bob Mau, Frederick R. Blattner, Nicole T. Perna. Genome Research 2004 July; 14(7):1394-403.
2004-Jan-01
GRIL-Genome Rearrangement and Inversion Locator Aaron E. Darling, Bob Mau, Frederick R. Blattner, Nicole T. Perna. Bioinformatics 2004 Jan;20(1):122-124
Analyzing patterns of microbial evolution using the Mauve genome alignment system. Aaron E. Darling, Todd J. Treangen, Xavier Messegeur, Nicole T. Perna. Comparative Genomics (Bergman Eds.), Humana Press, In press
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