mems::bmer Struct Reference

#include <SortedMerList.h>

List of all members.

Public Attributes
uint64	mer
	the actual binary encoded mer
smlSeqI_t	position
	starting position of this mer in the sequence

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Member Data Documentation

uint64 mems::bmer::mer

the actual binary encoded mer Definition at line 50 of file SortedMerList.h. Referenced by mems::SortedMerList::bsearch(), mems::SortedMerList::CalculateMaxMerSize(), mems::SeedOccurrenceList::construct(), mems::SortedMerList::FillDnaSML(), mems::SortedMerList::FillSML(), mems::SortedMerList::Find(), mems::SortedMerList::FindAll(), mems::SortedMerList::FindMer(), mems::MatchFinder::GetBreakpoint(), mems::MemorySML::operator[](), mems::MemorySML::Read(), and mems::SortedMerList::UniqueMerCount().

smlSeqI_t mems::bmer::position

starting position of this mer in the sequence Definition at line 49 of file SortedMerList.h. Referenced by mems::SeedOccurrenceList::construct(), mems::SortedMerList::FillDnaSML(), mems::SortedMerList::FillSML(), mems::MemorySML::operator[](), and mems::MemorySML::Read().

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The documentation for this struct was generated from the following file:

• libMems/SortedMerList.h

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