mems::AlnProgressTracker Struct Reference

#include <GreedyBreakpointElimination.h>

List of all members.

Public Attributes
gnSeqI	cur_leftend
double	prev_progress
gnSeqI	total_len

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Member Data Documentation

gnSeqI mems::AlnProgressTracker::cur_leftend

Definition at line 865 of file GreedyBreakpointElimination.h. Referenced by mems::Aligner::align(), mems::AlignLCBInParallel(), mems::ProgressiveAligner::doGappedAlignment(), and mems::ProgressiveAligner::refineAlignment().

double mems::AlnProgressTracker::prev_progress

Definition at line 866 of file GreedyBreakpointElimination.h. Referenced by mems::Aligner::align(), mems::AlignLCBInParallel(), mems::ProgressiveAligner::doGappedAlignment(), and mems::ProgressiveAligner::refineAlignment().

gnSeqI mems::AlnProgressTracker::total_len

Definition at line 864 of file GreedyBreakpointElimination.h. Referenced by mems::Aligner::align(), mems::AlignLCBInParallel(), mems::ProgressiveAligner::doGappedAlignment(), and mems::ProgressiveAligner::refineAlignment().

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The documentation for this struct was generated from the following file:

• libMems/GreedyBreakpointElimination.h

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