libMems/ProgressiveAligner.h File Reference

#include "libMems/SuperInterval.h"
#include "libMems/Aligner.h"
#include "libMems/PhyloTree.h"
#include "libMems/GreedyBreakpointElimination.h"
#include "libMems/CompactGappedAlignment.h"
#include "libMems/Islands.h"
#include <boost/type_traits/remove_pointer.hpp>
#include <boost/multi_array.hpp>
#include "libMems/SeedOccurrenceList.h"
#include "libMems/SubstitutionMatrix.h"
#include "libMems/MatchProjectionAdapter.h"

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namespace  mems


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